Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917603.1_cds_XP_016467175.1_59948
CDS Infomation

[gene=LOC107789816] [db_xref=GeneID:107789816] [protein=origin of replication complex subunit 3-like isoform X2] [protein_id=XP_016467175.1] [location=join(21771..21827,21929..22111,22236..22416,22772..22941,23047..23177,23852..24125,24268..24345,24824..24915,25014..25104,25792..25991,26391..26460,27232..27317,33571..33648,34765..34840,35720..35847,36634..36801,37600..37705)] [gbkey=CDS]
Sequence

ATGGATTCACCAAATACTGATCCTCTCACTGACCCATTTGCAGAAAACAATCTTCAGCCA
TACTTCGTGCTGCACAAATCATCAAAGTCTTCAGAATCTACTGCAAAATCTCCTGGAAAA
TCCCGGAAGAGAAGACTTGATTCTTCACCCAAAGTATCATCAACCAATGAAAATACCAGT
GATGACTTGAAAATGGAAGCTTTCCACTGCGTGTGGTCAAAAATTGAATCCAAGATCAAG
GATGCTTTGACGAGTATAAATGCTGATGTGTTTGATGAAATCGGACAATGGGTTTCTGAA
TCTTTTGATGAGATTTGTTCATGTAGAGGGCCCGTTGATCCATCAACTTCAAGCCTTCCA
TACCCTTTTGTTAATAATGGCGGTATAGTTAAAAAGCTCTTCACTGGTCTGGTTTTCACC
AAGAATATCGAAACTGTCGATGACATATTAACTTTTGCTGACCTTGGTTTAAACTTGAAA
TCTAGTGGATACCATGTCGCGAATATTTCCTCCTTGGATTTTTCTACCAAGAATGGCATT
GGGGGTTGTCTAAGAGGATTGCTGAGACAATTGCTTATGGTTGATGTAGAAGCAGCTGAA
ATGTCCCTTTTAGCATCATGGTATAACGACCGCGGGAAGTATGATAACCCCGTGATAGTG
ATTATTGAGGATTTGGAGAGGTGCTCTGGGACTCTCTTATCAGATTTCATCAATATGTTG
AGTGAATGGGCTGTTAAGATTCCAATCATCTTAATAGCGGGTGTTGCAACAAGTGTTGAT
GCTCCCAGAAATTTGCTCAGTTCGCGTGCACTTCAACATTTGTCTACATCGATATTCACC
TTGAAATCACCTGCTGAAAGGATGGATGCCATTATTGAGGCTGTTCTGGTAAAAGATTGT
GCTGGCTTTAGTGTTGGCCACAAGGTGGCGACTCTATTGAGGAACTATTTTTTAAAACAA
GAAGGAACAGTCACTTCATTTGTTAGAGCCTTAAAGATGGCAATAGTCCAACAACTTTCC
ATTGAGCCTCTTAGCTTCATGCTCAAGTTTTCAGTTGATGACGGAGATAATAAGAGGTCG
TGCAGTGAGGAACTTGCTAAATTGACAGAGGCATTGGTTAAGCATGCTTTCGATCTTCCA
TCGTACAGGACTTTTTCAGTACAACGGAATAAATATGTAGAACCAAATGTTATGACTCTA
GCCCATGGATTATCGGAACTGCAGAGAGTGCAGAAAGTATGGAGATCTCTCCTTATGTGC
TTGCATGAAGCCGGAAGATATCATAGAGTTGCACTGATGGACTTGTATTGGGAGGCATTG
GATCCTGGCCTGTACAACTCCAGGTCATCTGATAATAACCTTGAAAGTGCAAAAGGCATG
AGCTTGTTGTCAAATAATCATCATCATTTCAGACAGCAAAAGGCTGATTTTACAAATCAG
GTCATCCGCAAAATGAGGGATTTACCAGCTGCAAAGTTATCGCAGTTGCTTAAGAGTTGG
GAGAGGCTCACTGATGGGACAACTGAGGTTCATGAGAAGATTAATGAACTGCAGTTTCAA
ATGGTATCAGAGGATGGCAAAAGTCGCAGAGCAGAATTAACAGATATATCGAAGAGGCAT
ATCAATCGACGTAGTCTAAATGCATGCACATCAAGTGAAAAAGCCATGACGTTGGCAACT
AACTTGATAAGGGAGAATATGCAGCCCATTGAGTGTGTCCCATTTCATGAACTTGTTTGC
TTCAGGGATGTTGACAAACTCCAATCAGCTTTGGTTGGTGATCCCAGAAGAAGAGTTCAA
ATTGATCTCTTGGATTTCCACAAAATTCTCAAGTGTGGATGCTGCAGCAAGAGTGTGGGT
ACACTAGTACCATCTATGCATGACACCTCAATAATGTATACTCTGGCGCAGGAGCATGGT
GATCTCATCAATCTTCATGACTGGTTTCAATCTTTTAAAGCAATTATTTCTAGATCAGGA
AAGAAAGGATTGAAACAGTTGGCTTCACCAAAGAAAAGAAAGGACTCCAGCAGTTCTCAA
AACAATTCTGATGCATTGAGCCAAGCAAGATTTTGCAGGGCTGTCATGGAGCTGCAGATT
ACAGGATTGCTTCGCATGCCAAGCAAACGACGCCCTGATTATGTGCAACGAGTGGCGTTT
GGAGTGTAA

Peptide Sequence

PEP ID

XP_016467175.1
PEP Infomation

PREDICTED: origin of replication complex subunit 3-like isoform X2 [Nicotiana tabacum]
Sequence

MDSPNTDPLTDPFAENNLQPYFVLHKSSKSSESTAKSPGKSRKRRLDSSPKVSSTNENTS
DDLKMEAFHCVWSKIESKIKDALTSINADVFDEIGQWVSESFDEICSCRGPVDPSTSSLP
YPFVNNGGIVKKLFTGLVFTKNIETVDDILTFADLGLNLKSSGYHVANISSLDFSTKNGI
GGCLRGLLRQLLMVDVEAAEMSLLASWYNDRGKYDNPVIVIIEDLERCSGTLLSDFINML
SEWAVKIPIILIAGVATSVDAPRNLLSSRALQHLSTSIFTLKSPAERMDAIIEAVLVKDC
AGFSVGHKVATLLRNYFLKQEGTVTSFVRALKMAIVQQLSIEPLSFMLKFSVDDGDNKRS
CSEELAKLTEALVKHAFDLPSYRTFSVQRNKYVEPNVMTLAHGLSELQRVQKVWRSLLMC
LHEAGRYHRVALMDLYWEALDPGLYNSRSSDNNLESAKGMSLLSNNHHHFRQQKADFTNQ
VIRKMRDLPAAKLSQLLKSWERLTDGTTEVHEKINELQFQMVSEDGKSRRAELTDISKRH
INRRSLNACTSSEKAMTLATNLIRENMQPIECVPFHELVCFRDVDKLQSALVGDPRRRVQ
IDLLDFHKILKCGCCSKSVGTLVPSMHDTSIMYTLAQEHGDLINLHDWFQSFKAIISRSG
KKGLKQLASPKKRKDSSSSQNNSDALSQARFCRAVMELQITGLLRMPSKRRPDYVQRVAF
GV

Transcript Sequence

Gene sequence data has not been registered.